GAPSCORE: finding gene and protein names one word at a time
نویسندگان
چکیده
منابع مشابه
GAPSCORE: finding gene and protein names one word at a time
MOTIVATION New high-throughput technologies have accelerated the accumulation of knowledge about genes and proteins. However, much knowledge is still stored as written natural language text. Therefore, we have developed a new method, GAPSCORE, to identify gene and protein names in text. GAPSCORE scores words based on a statistical model of gene names that quantifies their appearance, morphology...
متن کاملFinding Key Bloggers, One Post At A Time
User generated content in general, and blogs in particular, form an interesting and relatively little explored domain for mining knowledge. We address the task of blog distillation: to find blogs that are principally devoted to a given topic, as opposed to blogs that merely happen to discuss the topic in passing. Working in the setting of statistical language modeling, we model the task by aggr...
متن کاملBioThesaurus: a web-based thesaurus of protein and gene names
UNLABELLED BioThesaurus is a web-based system designed to map a comprehensive collection of protein and gene names to protein entries in the UniProt Knowledgebase. Currently covering more than two million proteins, BioThesaurus consists of over 2.8 million names extracted from multiple molecular biological databases according to the database cross-references in iProClass. The BioThesaurus web s...
متن کاملProbing gene expression in live cells, one protein molecule at a time.
We directly observed real-time production of single protein molecules in individual Escherichia coli cells. A fusion protein of a fast-maturing yellow fluorescent protein (YFP) and a membrane-targeting peptide was expressed under a repressed condition. The membrane-localized YFP can be detected with single-molecule sensitivity. We found that the protein molecules are produced in bursts, with ea...
متن کاملPeptide and Protein Delivery at a Glance
Peptide and protein drugs have found an important position in therapeutics. Recent advances in pharmaceutical biotechnology have led to an increase in the number of protein products in the market. As these therapeutic proteins and peptides are made available, it will be essential to formulate these drugs into safe and effective delivery systems. The twenty different naturally occurring amin...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2004
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btg393